Bacterial Evolution

Jun 4

Topological network representation of S. aureus genome profiles. Color corresponds to enrichment in mecA, an antibiotic resistance gene.

“Characterizing Scales of Genetic Recombination and Antibiotic Resistance in Pathogenic Bacteria Using Topological Data Analysis.”

AUTHORS: Kevin Emmett and Raul Rabadan.
Lecture Notes in Computer Science 2014. Volume 8609, pp 540-551.

LINK TO PUBLICATION:
arXiv:1406.1219.

THE RABADAN LAB

Parametric Inference using Persistence Diagrams: A Case Study in Population Genetics